survfit0
Convert the format of a survfit object.
Description
Add the point for a starting time (time 0) to a survfit object's elements. This is useful for plotting.
Usage
survfit0(x, start.time=0)
Arguments
x | a survfit object |
start.time | the desired starting time; see details below. |
Details
Survival curves are traditionally plotted forward from time 0, but since the true starting time is not known as a part of the data, the survfit
routine does not include a time 0 value in the resulting object. Someone might look at cumulative mortgage defaults versus calendar year, for instance, with the ‘time’ value a Date object. The plotted curve probably should not start at 0 = 1970/01/01. Due to this uncertainty, it was decided not to include a "time 0" as part of a survfit object. If the original survfit
call included a start.time
argument, that value is of course retained.
Whether that (1989) decision was wise or foolish, it is now far too late to change it. (We tried it once as a trial, resulting in over 20 errors in the survival test suite. We extrapolate that it might break 1/2 - 2/3 of the other CRAN packages that depend on survival, if made a default.) If the original survfit
call included a start.time
argument, that value is of course retained.
One problem with this choice is that some functions must choose a starting point, plots for example. This utility function is used by plot.survfit
and summary.survfit
to do so, adding a new time point at the front of each curve in a consistent way: the optional argument to the survfit0
function as the first choice (if supplied), then the user's start.time
if present, otherwise min(0, x$time)
. The resulting object is not guarranteed to work with functions that further manipulate a survfit
object such as subscripting, aggregation, pseudovalues, etc. (remember the 20 errors). Rather it is intended as a penultimate step, most often when creating a plot.
Value
a reformulated version of the object with an initial data point at start.time
added. The time
, surv
, pstate
, cumhaz
, std.err
, std.cumhaz
and other components will all be aligned, so as to make plots and summaries easier to produce.
Copyright (©) 1999–2012 R Foundation for Statistical Computing.
Licensed under the GNU General Public License.