logtrans Estimate log Transformation Parameter

Description

Find and optionally plot the marginal (profile) likelihood for alpha for a transformation model of the form log(y + alpha) ~ x1 + x2 + ....

Usage

logtrans(object, ...)

## Default S3 method:
logtrans(object, ..., alpha = seq(0.5, 6, by = 0.25) - min(y),
         plotit = TRUE, interp =, xlab = "alpha",
         ylab = "log Likelihood")

## S3 method for class 'formula'
logtrans(object, data, ...)

## S3 method for class 'lm'
logtrans(object, ...)

Arguments

object	Fitted linear model object, or formula defining the untransformed model that is y ~ x1 + x2 + .... The function is generic.
...	If object is a formula, this argument may specify a data frame as for lm.
alpha	Set of values for the transformation parameter, alpha.
plotit	Should plotting be done?
interp	Should the marginal log-likelihood be interpolated with a spline approximation? (Default is TRUE if plotting is to be done and the number of real points is less than 100.)
xlab	as for plot.
ylab	as for plot.
data	optional data argument for lm fit.

Value

List with components x (for alpha) and y (for the marginal log-likelihood values).

Side Effects

A plot of the marginal log-likelihood is produced, if requested, together with an approximate mle and 95% confidence interval.

References

Venables, W. N. and Ripley, B. D. (2002) Modern Applied Statistics with S. Fourth edition. Springer.

See Also

boxcox

Examples

logtrans(Days ~ Age*Sex*Eth*Lrn, data = quine,
         alpha = seq(0.75, 6.5, len=20))